Basic Information
Locus ID:
gene:TRIDC6BG052100
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 553604901 | 553605368 | - | gene:TRIDC6BG052100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.18 | 16,513.89 Da | 37.40 | 92.64 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 80 | 123 | 6.9E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 80 | 127 | 8.7E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 56 | 131 | 1.9E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 81 | 122 | 2.5E-4 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 81 | 123 | 10.158304 | IPR001841 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42200.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037451428.1 | E3 ubiquitin-protein ligase ATL23-like [Triticum dicoccoides] | 0 |
| Q8L9W3 | E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis thaliana OX=3702 GN=ATL23 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6PP92 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG052100.