Basic Information
Locus ID:
gene:TRIDC6BG051890
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 551653182 | 551667251 | - | gene:TRIDC6BG051890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.33 | 69,049.33 Da | 36.55 | 96.26 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 63 | 3.5E-14 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 311 | 577 | 9.0E-43 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 132 | 174 | 1.3E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 25 | 188 | 1.31E-38 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 288 | 578 | 1.91E-73 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 205 | 1.1E-56 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 280 | 384 | 3.3E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 385 | 597 | 5.1E-61 | - |
| SMART | SM00220 | serkin_6 | 308 | 577 | 3.4E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 308 | 598 | 34.633259 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 427 | 439 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 314 | 336 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16000.1 | NSP-interacting kinase 1. NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). | 0 |
| RefSeq | XP_037455894.1 | LRR receptor kinase SERL2-like [Triticum dicoccoides] | 0 |
| Q9FP13 | LRR receptor kinase SERL2 OS=Oryza sativa subsp. japonica OX=39947 GN=SERL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453PGR3 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG051890.