Basic Information
Locus ID:
gene:TRIDC6BG049690
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 532807236 | 532810241 | - | gene:TRIDC6BG049690 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.36 | 79,476.91 Da | 35.94 | 84.53 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 49 | 299 | 1.75336E-73 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 393 | 665 | 1.32934E-84 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 390 | 592 | 2.2E-42 | IPR001245 |
| Pfam | PF00139 | Legume lectin domain | 50 | 304 | 3.8E-54 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 49 | 305 | 6.06E-56 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 364 | 665 | 2.53E-71 | IPR011009 |
| Gene3D | G3DSA:2.60.120.200 | - | 47 | 312 | 1.5E-65 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 467 | 670 | 1.0E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 372 | 466 | 1.2E-27 | - |
| SMART | SM00220 | serkin_6 | 387 | 664 | 1.0E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 387 | 681 | 36.060795 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 26 | 6.0 | - |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 393 | 419 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 512 | 524 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06740.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_037455642.1 | probable L-type lectin-domain containing receptor kinase S.5 [Triticum dicoccoides] | 0 |
| Q9FG33 | Probable L-type lectin-domain containing receptor kinase S.5 OS=Arabidopsis thaliana OX=3702 GN=LECRKS5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6PMS1 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG049690.