Basic Information
Locus ID:
gene:TRIDC6BG048670
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 521853031 | 521854939 | + | gene:TRIDC6BG048670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 62,661.72 Da | 40.78 | 95.10 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 254 | 549 | 4.6E-39 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 105 | 148 | 2.7E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 42 | 100 | 8.4E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 19 | 174 | 1.66E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 233 | 550 | 8.5E-70 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 335 | 568 | 1.7E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 217 | 334 | 7.6E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 193 | 5.8E-54 | IPR032675 |
| SMART | SM00220 | serkin_6 | 253 | 556 | 1.1E-34 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 63 | 87 | 4.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 135 | 160 | 53.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 111 | 134 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 14 | 39 | 240.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 253 | 556 | 35.297558 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 259 | 282 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 111 | 124 | 5.6E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 66 | 79 | 5.6E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47570.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_044415098.1 | probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Triticum aestivum] | 0 |
| Q2R2D5 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. japonica OX=39947 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PP17 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG048670.