Basic Information
Locus ID:
gene:TRIDC6BG047570
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 509610520 | 509614901 | + | gene:TRIDC6BG047570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 80,065.89 Da | 61.11 | 67.20 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 183 | 485 | 3.5E-52 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 182 | 487 | 6.28E-86 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 180 | 491 | 1.8E-89 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 182 | 488 | 52.491745 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 183 | 198 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 431 | 448 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 681 | 715 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 693 | 707 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 551 | 566 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 623 | 641 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 549 | 611 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 135 | 160 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 623 | 658 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G46740.1 | ubiquitin-specific protease 21. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_037453173.1 | ubiquitin carboxyl-terminal hydrolase 21-like [Triticum dicoccoides] | 0 |
| Q9FIQ1 | Ubiquitin carboxyl-terminal hydrolase 21 OS=Arabidopsis thaliana OX=3702 GN=UBP21 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6PNY3 | Ubiquitin carboxyl-terminal hydrolase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG047570.