Basic Information
Locus ID:
gene:TRIDC6BG046770
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
lysM domain receptor-like kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 500629183 | 500638835 | + | gene:TRIDC6BG046770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 70,202.05 Da | 39.28 | 88.97 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 190 | 219 | 3.44742E-4 | IPR018392 |
| Pfam | PF01476 | LysM domain | 192 | 219 | 0.011 | IPR018392 |
| Pfam | PF00069 | Protein kinase domain | 385 | 626 | 1.1E-36 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 350 | 631 | 3.32E-62 | IPR011009 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 188 | 231 | 5.9E-5 | IPR036779 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 434 | 645 | 1.5E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 343 | 433 | 9.9E-13 | - |
| SMART | SM00220 | serkin_6 | 355 | 638 | 6.2E-26 | IPR000719 |
| SMART | SM00257 | LysM_2 | 127 | 174 | 0.56 | IPR018392 |
| SMART | SM00257 | LysM_2 | 191 | 233 | 0.9 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 357 | 638 | 31.156296 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 479 | 491 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 268 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 333 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_037453136.1 | serine/threonine receptor-like kinase NFP [Triticum dicoccoides] | 0 |
| Q0GXS4 | Serine/threonine receptor-like kinase NFP OS=Medicago truncatula OX=3880 GN=NFP PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PLD4 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG046770.