Basic Information
Locus ID:
gene:TRIDC6BG045620
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 485387414 | 485387875 | + | gene:TRIDC6BG045620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.25 | 16,188.29 Da | 61.36 | 82.94 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 88 | 130 | 1.3E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 80 | 136 | 8.03E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 48 | 133 | 3.5E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 88 | 129 | 2.7E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 88 | 130 | 11.176261 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 81 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11680.1 | Zinc finger, C3HC4 type (RING finger) family protein. | 0 |
| RefSeq | XP_037453914.1 | E3 ubiquitin-protein ligase ATL23-like [Triticum dicoccoides] | 0 |
| Q6ZSG1 | E3 ubiquitin-protein ligase ARK2C OS=Homo sapiens OX=9606 GN=ARK2C PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PMP8 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG045620.