Basic Information
Locus ID:
gene:TRIDC6BG045440
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 482119541 | 482123516 | - | gene:TRIDC6BG045440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.62 | 31,302.81 Da | 32.27 | 75.30 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 1 | 282 | 7.00894E-66 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 77 | 114 | 4.0E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 37 | 73 | 0.0027 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 202 | 240 | 0.04 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 1 | 31 | 3.0E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 248 | 282 | 4.8E-7 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 1 | 282 | 1.83E-73 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 1 | 283 | 3.6E-73 | IPR015943 |
| SMART | SM00320 | WD40_4 | 1 | 31 | 0.0074 | IPR001680 |
| SMART | SM00320 | WD40_4 | 34 | 73 | 2.8E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 161 | 197 | 3.8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 76 | 115 | 1.2E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 200 | 241 | 3.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 244 | 283 | 2.3E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 120 | 157 | 0.48 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 83 | 115 | 11.744925 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 251 | 283 | 15.454345 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1 | 40 | 14.78598 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 41 | 82 | 12.17936 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 1 | 31 | 11.471045 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 41 | 78 | 9.177421 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 83 | 115 | 9.810144 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 251 | 283 | 14.054668 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G64730.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037447707.1 | WD repeat domain-containing protein 83 [Triticum dicoccoides] | 0 |
| Q9BRX9 | WD repeat domain-containing protein 83 OS=Homo sapiens OX=9606 GN=WDR83 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D6AAV2 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG045440.