Basic Information
Locus ID:
gene:TRIDC6BG045290
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
In Between Ring fingers
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 479451551 | 479455922 | - | gene:TRIDC6BG045290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.52 | 24,042.47 Da | 50.29 | 63.38 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01485 | IBR domain, a half RING-finger domain | 112 | 165 | 1.2E-9 | IPR002867 |
| Pfam | PF13445 | RING-type zinc-finger | 28 | 74 | 4.3E-6 | IPR027370 |
| SUPERFAMILY | SSF57850 | RING/U-box | 106 | 169 | 2.83E-6 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 176 | 213 | 7.3E-8 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 26 | 106 | 2.52E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 23 | 110 | 1.7E-18 | IPR013083 |
| Gene3D | G3DSA:1.20.120.1750 | - | 163 | 217 | 2.3E-8 | - |
| SMART | SM00647 | ibrneu5 | 97 | 165 | 2.3E-8 | IPR002867 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 28 | 74 | 9.420654 | IPR001841 |
| ProSiteProfiles | PS51873 | TRIAD supradomain profile. | 24 | 222 | 22.146088 | IPR044066 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 47 | 56 | - | IPR017907 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14250.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_044409522.1 | probable E3 ubiquitin-protein ligase ARI9 [Triticum aestivum] | 0 |
| TrEMBL | A0A453P8G0 | RBR-type E3 ubiquitin transferase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG045290.