Basic Information
Locus ID:
gene:TRIDC6BG045090
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Beach domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 477022449 | 477049817 | + | gene:TRIDC6BG045090 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 295,995.34 Da | 51.27 | 89.14 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01201 | PH_BEACH | 1822 | 1932 | 5.44686E-24 | IPR023362 |
| CDD | cd06071 | Beach | 1959 | 2236 | 1.17515E-140 | IPR000409 |
| Pfam | PF14844 | PH domain associated with Beige/BEACH | 1832 | 1931 | 9.9E-26 | IPR023362 |
| Pfam | PF15787 | Domain of unknown function (DUF4704) | 385 | 663 | 2.5E-44 | IPR031570 |
| Pfam | PF02138 | Beige/BEACH domain | 1960 | 2236 | 1.9E-111 | IPR000409 |
| Pfam | PF00400 | WD domain, G-beta repeat | 2390 | 2420 | 8.0E-7 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 2355 | 2670 | 2.2E-32 | IPR036322 |
| SUPERFAMILY | SSF81837 | BEACH domain | 1945 | 2236 | 1.44E-118 | IPR036372 |
| SUPERFAMILY | SSF50729 | PH domain-like | 1823 | 1935 | 2.27E-18 | - |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 89 | 315 | 3.17E-6 | IPR013320 |
| Gene3D | G3DSA:2.130.10.10 | - | 2525 | 2680 | 2.1E-6 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 2272 | 2524 | 1.8E-20 | IPR015943 |
| Gene3D | G3DSA:2.30.29.30 | - | 1822 | 1931 | 1.4E-27 | IPR011993 |
| Gene3D | G3DSA:1.10.1540.10 | BEACH domain | 1948 | 2236 | 2.0E-129 | IPR036372 |
| SMART | SM00320 | WD40_4 | 2382 | 2421 | 3.2E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 2631 | 2671 | 0.24 | IPR001680 |
| SMART | SM01026 | Beach_2 | 1959 | 2236 | 6.9E-175 | IPR000409 |
| SMART | SM00320 | WD40_4 | 2469 | 2508 | 0.35 | IPR001680 |
| ProSiteProfiles | PS51783 | BEACH-type PH domain profile. | 1819 | 1932 | 30.782505 | IPR023362 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 2389 | 2422 | 14.084198 | IPR001680 |
| ProSiteProfiles | PS50197 | BEACH domain profile. | 1947 | 2236 | 108.663521 | IPR000409 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 2389 | 2422 | 11.65559 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 704 | 751 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1118 | 1139 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 704 | 736 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45540.1 | WD-40 repeat family protein / beige-related. | 0 |
| RefSeq | XP_037450893.1 | BEACH domain-containing protein C2-like [Triticum dicoccoides] | 0 |
| F4IG73 | BEACH domain-containing protein C2 OS=Arabidopsis thaliana OX=3702 GN=BCHC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PMT6 | DUF4704 domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG045090.