Basic Information
Locus ID:
gene:TRIDC6BG044860
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 475040132 | 475044753 | - | gene:TRIDC6BG044860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 87,255.50 Da | 53.34 | 79.05 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 83 | 238 | 4.11368E-40 | - |
| Pfam | PF00069 | Protein kinase domain | 572 | 775 | 1.6E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 544 | 776 | 4.86E-65 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 81 | 200 | 3.68E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 547 | 641 | 4.8E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 642 | 788 | 7.1E-45 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 81 | 220 | 2.6E-9 | IPR014729 |
| SMART | SM00220 | serkin_6 | 569 | 788 | 1.9E-19 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 569 | 788 | 36.428276 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 687 | 699 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 575 | 596 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 313 | - | - |
| Coils | Coil | Coil | 423 | 443 | - | - |
| Coils | Coil | Coil | 451 | 552 | - | - |
| Coils | Coil | Coil | 399 | 419 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_037455273.1 | U-box domain-containing protein 33-like [Triticum dicoccoides] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6PMV7 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG044860.