Basic Information
Locus ID:
gene:TRIDC6BG043240
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 460597675 | 460599023 | - | gene:TRIDC6BG043240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.52 | 26,077.89 Da | 65.28 | 83.82 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16745 | RING-HC_AtRMA_like | 29 | 80 | 9.03953E-25 | - |
| Pfam | PF00097 | Zinc finger, C3HC4 type (RING finger) | 31 | 78 | 9.2E-10 | IPR018957 |
| SUPERFAMILY | SSF57850 | RING/U-box | 28 | 91 | 6.24E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 16 | 120 | 9.1E-16 | IPR013083 |
| SMART | SM00184 | ring_2 | 31 | 78 | 5.7E-10 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 31 | 79 | 12.356501 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 46 | 55 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 95 | 146 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27470.1 | RING membrane-anchor 3. Encodes a RING finger E3 ubiquitin ligase. | 0 |
| RefSeq | XP_037450121.1 | E3 ubiquitin-protein ligase RMA1H1-like [Triticum dicoccoides] | 0 |
| Q6R567 | E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PPI0 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG043240.