Basic Information
Locus ID:
gene:TRIDC6BG043140
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 459749850 | 459755494 | + | gene:TRIDC6BG043140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 86,740.60 Da | 56.10 | 65.47 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 600 | 638 | 0.13 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 423 | 461 | 3.4E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 314 | 345 | 1.8E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 468 | 504 | 0.0049 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 309 | 776 | 4.66E-58 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 303 | 672 | 8.7E-61 | IPR015943 |
| SMART | SM00320 | WD40_4 | 507 | 545 | 1.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 421 | 462 | 3.8E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 558 | 597 | 7.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 307 | 346 | 8.0E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 598 | 639 | 0.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 465 | 504 | 4.0E-8 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 314 | 347 | 14.953072 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 471 | 505 | 10.100143 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 428 | 465 | 9.177421 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 428 | 471 | 11.44416 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 471 | 505 | 12.112524 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 314 | 347 | 12.341042 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 333 | 347 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 333 | 347 | 3.8E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 449 | 463 | 3.8E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 491 | 505 | 3.8E-5 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 736 | 757 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 146 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 736 | 752 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 202 | 291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 202 | 250 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 50 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G54200.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037452207.1 | WD repeat-containing protein 44-like isoform X1 [Triticum dicoccoides] | 0 |
| Q9XSC3 | WD repeat-containing protein 44 OS=Bos taurus OX=9913 GN=WDR44 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PPH2 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG043140.