Basic Information
Locus ID:
gene:TRIDC6BG042910
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine Rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 457489693 | 457492132 | - | gene:TRIDC6BG042910 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 45,392.15 Da | 55.69 | 104.01 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 109 | 130 | 0.094 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 265 | 288 | 0.047 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 135 | 155 | 0.0055 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 212 | 234 | 0.036 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 186 | 209 | 0.85 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 102 | 369 | 1.36E-44 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 343 | 408 | 7.0E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 173 | 1.3E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 174 | 255 | 2.7E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 256 | 342 | 6.0E-15 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 292 | 317 | 5.6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 108 | 133 | 4.2 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 160 | 185 | 0.0089 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 318 | 343 | 5.6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 212 | 237 | 0.18 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 186 | 211 | 4.2E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 239 | 264 | 9.8 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 265 | 290 | 0.13 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 372 | 397 | 12.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 134 | 159 | 3.3 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G23340.1 | RNI-like superfamily protein. | 0 |
| RefSeq | XP_037453759.1 | F-box/LRR-repeat protein 2-like [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6PMC5 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG042910.