Basic Information
Locus ID:
gene:TRIDC6BG042370
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 451948180 | 451952816 | - | gene:TRIDC6BG042370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.56 | 114,877.38 Da | 37.01 | 96.59 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 768 | 1036 | 2.68653E-96 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 364 | 386 | 1.6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 552 | 608 | 2.7E-11 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 463 | 513 | 1.9E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 764 | 1029 | 6.9E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 748 | 1032 | 3.51E-77 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 81 | 427 | 1.1E-57 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 338 | 668 | 1.36E-47 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 838 | 1044 | 2.4E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 359 | 672 | 4.9E-80 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 307 | 2.9E-64 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 726 | 837 | 1.9E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 308 | 358 | 2.1E-8 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 571 | 594 | 5.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 386 | 409 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 462 | 485 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 595 | 618 | 15.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 762 | 1033 | 5.1E-35 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 100 | 120 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 124 | 148 | 53.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 267 | 290 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 486 | 509 | 41.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 573 | 594 | 7.796663 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 597 | 620 | 7.850567 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 762 | 1033 | 37.276318 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 884 | 896 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 768 | 790 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 574 | 587 | 9.9E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 595 | 608 | 9.9E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02220.1 | phytosulfokin receptor 1. Encodes a protein interacting with phytosulfokine, a five amino acid sulfated peptide (YIYTQ). | 0 |
| RefSeq | XP_037453325.1 | phytosulfokine receptor 1-like [Triticum dicoccoides] | 0 |
| Q8LPB4 | Phytosulfokine receptor 1 OS=Daucus carota OX=4039 GN=PSKR PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PL30 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG042370.