Basic Information
Locus ID:
gene:TRIDC6BG041760
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Calcium-binding EGF-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 442642806 | 442714361 | + | gene:TRIDC6BG041760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 83,567.91 Da | 37.04 | 79.67 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 429 | 698 | 5.73021E-86 | - |
| CDD | cd00054 | EGF_CA | 301 | 343 | 1.17235E-7 | - |
| Pfam | PF07645 | Calcium-binding EGF domain | 301 | 342 | 1.4E-7 | IPR001881 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 30 | 92 | 2.1E-8 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 425 | 693 | 2.8E-45 | IPR000719 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 299 | 344 | 2.51E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 407 | 715 | 1.89E-73 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 249 | 343 | 3.8E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 499 | 705 | 3.8E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 397 | 498 | 4.3E-28 | - |
| SMART | SM00179 | egfca_6 | 301 | 343 | 3.3E-6 | IPR001881 |
| SMART | SM00181 | egf_5 | 304 | 343 | 0.9 | IPR000742 |
| SMART | SM00220 | serkin_6 | 423 | 699 | 4.7E-31 | IPR000719 |
| SMART | SM00181 | egf_5 | 250 | 300 | 20.0 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 423 | 707 | 36.385876 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 301 | 343 | 12.647362 | IPR000742 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 546 | 558 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 301 | 327 | - | IPR018097 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 318 | 329 | - | IPR000152 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 429 | 452 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21230.1 | wall associated kinase 5. encodes a wall-associated kinase | 0 |
| RefSeq | XP_037454556.1 | wall-associated receptor kinase 5-like [Triticum dicoccoides] | 0 |
| Q9LMN7 | Wall-associated receptor kinase 5 OS=Arabidopsis thaliana OX=3702 GN=WAK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6PM44 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG041760.