Basic Information
Locus ID:
gene:TRIDC6BG041170
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 436095128 | 436099743 | + | gene:TRIDC6BG041170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 114,782.76 Da | 34.84 | 98.97 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 576 | 635 | 5.5E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 208 | 267 | 2.2E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 740 | 1032 | 1.6E-39 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 68 | 107 | 1.9E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 406 | 661 | 4.25E-59 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 715 | 1033 | 4.59E-70 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 91 | 398 | 1.56E-50 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 189 | 301 | 8.7E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 373 | 673 | 8.0E-90 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 70 | 185 | 4.0E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 302 | 372 | 6.7E-15 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 821 | 1050 | 5.4E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 702 | 820 | 2.7E-23 | - |
| SMART | SM00369 | LRR_typ_2 | 501 | 525 | 6.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 550 | 574 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 351 | 374 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 230 | 254 | 14.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 739 | 1037 | 5.0E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 158 | 181 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 381 | 404 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 206 | 229 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 622 | 647 | 6.2 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 739 | 1037 | 35.763981 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 745 | 768 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 870 | 882 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47110.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037451607.1 | receptor kinase-like protein Xa21 [Triticum dicoccoides] | 0 |
| Q9SD62 | Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana OX=3702 GN=At3g47110 PE=3 SV=1 | 0 | |
| TrEMBL | A0A453P389 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG041170.