Basic Information
Locus ID:
gene:TRIDC6BG037670
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 385662559 | 385665956 | - | gene:TRIDC6BG037670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.31 | 25,658.85 Da | 59.22 | 81.67 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16486 | mRING-H2-C3H2C2D_ZSWM2 | 99 | 142 | 2.66155E-15 | - |
| Pfam | PF13639 | Ring finger domain | 99 | 142 | 1.8E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 84 | 148 | 1.18E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 66 | 147 | 1.1E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 100 | 141 | 9.8E-7 | IPR001841 |
| SMART | SM00744 | ringv_2 | 99 | 142 | 0.0047 | IPR011016 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 100 | 142 | 13.153163 | IPR001841 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10150.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037452247.1 | RING-H2 finger protein ATL58-like [Triticum dicoccoides] | 0 |
| Q9SN28 | RING-H2 finger protein ATL7 OS=Arabidopsis thaliana OX=3702 GN=ATL7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6PLI8 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG037670.