Basic Information
Locus ID:
gene:TRIDC6BG035380
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Sigma factor PP2C-like phosphatases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 336566431 | 336603799 | + | gene:TRIDC6BG035380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.17 | 121,074.30 Da | 44.38 | 87.33 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00143 | PP2Cc | 121 | 395 | 5.33112E-57 | IPR001932 |
| CDD | cd00038 | CAP_ED | 613 | 739 | 3.21724E-12 | IPR000595 |
| CDD | cd00038 | CAP_ED | 487 | 596 | 1.8653E-22 | IPR000595 |
| Pfam | PF00027 | Cyclic nucleotide-binding domain | 632 | 732 | 3.1E-8 | IPR000595 |
| Pfam | PF00481 | Protein phosphatase 2C | 128 | 373 | 9.2E-37 | IPR001932 |
| Pfam | PF00069 | Protein kinase domain | 807 | 1029 | 2.9E-30 | IPR000719 |
| Pfam | PF00027 | Cyclic nucleotide-binding domain | 506 | 597 | 2.6E-19 | IPR000595 |
| SUPERFAMILY | SSF51206 | cAMP-binding domain-like | 606 | 743 | 2.62E-17 | IPR018490 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 765 | 1057 | 6.64E-44 | IPR011009 |
| SUPERFAMILY | SSF51206 | cAMP-binding domain-like | 466 | 597 | 1.44E-26 | IPR018490 |
| SUPERFAMILY | SSF81606 | PP2C-like | 87 | 397 | 8.5E-54 | IPR036457 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 774 | 859 | 1.2E-57 | - |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 463 | 601 | 6.5E-31 | IPR014710 |
| Gene3D | G3DSA:3.60.40.10 | - | 100 | 396 | 1.6E-64 | IPR036457 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 860 | 1043 | 1.2E-57 | - |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 604 | 749 | 4.9E-21 | IPR014710 |
| SMART | SM00332 | PP2C_4 | 106 | 393 | 5.4E-57 | IPR001932 |
| SMART | SM00220 | serkin_6 | 794 | 1029 | 2.9E-22 | IPR000719 |
| SMART | SM00100 | cnmp_10 | 613 | 753 | 9.3E-8 | IPR000595 |
| SMART | SM00100 | cnmp_10 | 487 | 611 | 1.9E-12 | IPR000595 |
| ProSiteProfiles | PS51746 | PPM-type phosphatase domain profile. | 105 | 395 | 42.031746 | IPR001932 |
| ProSiteProfiles | PS50042 | cAMP/cGMP binding motif profile. | 487 | 596 | 26.821001 | IPR000595 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 775 | 1029 | 25.502695 | IPR000719 |
| ProSiteProfiles | PS50042 | cAMP/cGMP binding motif profile. | 613 | 736 | 15.5302 | IPR000595 |
| ProSitePatterns | PS01032 | PPM-type phosphatase domain signature. | 141 | 149 | - | IPR000222 |
| PRINTS | PR00103 | cAMP-dependent protein kinase signature | 523 | 537 | 6.8E-6 | - |
| PRINTS | PR00103 | cAMP-dependent protein kinase signature | 508 | 522 | 6.8E-6 | - |
| PRINTS | PR00103 | cAMP-dependent protein kinase signature | 558 | 567 | 6.8E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 58 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20050.1 | protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases. | 0 |
| RefSeq | XP_037453156.1 | protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein-like isoform X2 [Triticum dicoccoides] | 0 |
| Q9SL76 | Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=At2g20050/At2g20040 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6PN93 | protein-serine/threonine phosphatase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG035380.