Basic Information
Locus ID:
gene:TRIDC6BG034590
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 321873904 | 321922254 | - | gene:TRIDC6BG034590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 31,312.89 Da | 45.24 | 76.56 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 67 | 222 | 1.4E-28 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 65 | 278 | 1.04E-48 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 49 | 279 | 6.8E-57 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 67 | 279 | 36.469696 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 68 | 83 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G22310.1 | ubiquitin-specific protease 4. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_044414943.1 | ubiquitin carboxyl-terminal hydrolase 4-like [Triticum aestivum] | 0 |
| Q8LAM0 | Ubiquitin carboxyl-terminal hydrolase 4 OS=Arabidopsis thaliana OX=3702 GN=UBP4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6PJR6 | USP domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG034590.