Basic Information
Locus ID:
gene:TRIDC6BG032450
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
EBF1
Description:
Leucine-rich repeat - CC (cysteine-containing) subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 273677032 | 273679862 | + | gene:TRIDC6BG032450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.97 | 68,176.69 Da | 42.91 | 103.13 | 0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 221 | 244 | 9.0E-4 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 565 | 587 | 0.53 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 515 | 534 | 1.1 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 345 | 633 | 2.33E-37 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 57 | 102 | 1.83E-6 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 146 | 412 | 1.28E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 60 | 297 | 1.9E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 298 | 453 | 2.8E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 454 | 648 | 2.2E-32 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 485 | 510 | 0.063 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 379 | 404 | 0.0076 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 539 | 564 | 2.3 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 166 | 194 | 230.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 221 | 246 | 1.3E-7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 591 | 616 | 620.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 512 | 537 | 0.029 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 353 | 378 | 100.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 459 | 484 | 30.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 247 | 272 | 0.047 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 273 | 298 | 0.15 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 565 | 589 | 0.042 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 195 | 220 | 6.3 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_037452414.1 | EIN3-binding F-box protein 1-like [Triticum dicoccoides] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PJA8 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG032450.