Basic Information
Locus ID:
gene:TRIDC6BG029110
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 227428140 | 227436798 | - | gene:TRIDC6BG029110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.13 | 78,663.01 Da | 48.90 | 88.78 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 117 | 175 | 7.2E-12 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 404 | 619 | 2.9E-28 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 69 | 85 | 0.13 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 381 | 677 | 4.63E-57 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 223 | 9.07E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 3 | 236 | 1.5E-43 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 480 | 702 | 2.0E-42 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 368 | 479 | 5.9E-23 | - |
| SMART | SM00369 | LRR_typ_2 | 69 | 93 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 115 | 138 | 0.68 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 117 | 138 | 7.427029 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 402 | 682 | 29.629824 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 408 | 431 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 227 | 264 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 236 | 258 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_037453867.1 | protein STRUBBELIG-RECEPTOR FAMILY 8-like [Triticum dicoccoides] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PK95 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG029110.