Basic Information
Locus ID:
gene:TRIDC6BG028480
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Aspartyl protease
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 221730330 | 221736551 | - | gene:TRIDC6BG028480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 44,778.31 Da | 41.27 | 94.22 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01796 | Ubl_Ddi1_like | 1 | 70 | 3.12212E-20 | IPR033882 |
| CDD | cd14309 | UBA_scDdi1_like | 373 | 408 | 9.65335E-12 | - |
| CDD | cd05479 | RP_DDI | 180 | 303 | 3.42703E-73 | IPR019103 |
| Pfam | PF09668 | Aspartyl protease | 173 | 295 | 5.3E-55 | IPR019103 |
| Pfam | PF00240 | Ubiquitin family | 4 | 72 | 8.3E-13 | IPR000626 |
| Pfam | PF00627 | UBA/TS-N domain | 373 | 407 | 8.9E-9 | IPR015940 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 1 | 75 | 6.45E-18 | IPR029071 |
| SUPERFAMILY | SSF46934 | UBA-like | 353 | 410 | 6.45E-11 | IPR009060 |
| SUPERFAMILY | SSF50630 | Acid proteases | 180 | 296 | 8.44E-26 | IPR021109 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 84 | 9.5E-18 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 334 | 410 | 1.3E-10 | - |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 174 | 320 | 3.6E-43 | IPR021109 |
| SMART | SM00165 | uba_6 | 372 | 409 | 1.6E-7 | IPR015940 |
| SMART | SM00213 | ubq_7 | 1 | 72 | 5.7E-9 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 70 | 15.688385 | IPR000626 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 371 | 410 | 13.149322 | IPR015940 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 361 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 342 | - | - |
| Coils | Coil | Coil | 125 | 145 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13235.3 | ubiquitin family protein. | 0 |
| RefSeq | XP_037452598.1 | protein DNA-DAMAGE INDUCIBLE 1-like [Triticum dicoccoides] | 0 |
| Q1EBV4 | Protein DNA-DAMAGE INDUCIBLE 1 OS=Arabidopsis thaliana OX=3702 GN=DDI1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PIH7 | DNA damage-inducible protein 1 OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG028480.