Basic Information
Locus ID:
gene:TRIDC6BG026750
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
VID27 cytoplasmic protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 204088297 | 204091508 | + | gene:TRIDC6BG026750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 70,062.69 Da | 33.43 | 70.39 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08553 | VID27 C-terminal WD40-like domain | 270 | 586 | 2.6E-44 | IPR013863 |
| SUPERFAMILY | SSF101908 | Putative isomerase YbhE | 265 | 502 | 5.49E-11 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 324 | 615 | 2.0E-7 | IPR015943 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 43 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33400.1 | Vacuolar import/degradation, Vid27-related protein. | 0 |
| RefSeq | XP_037452062.1 | protein CYPRO4-like [Triticum dicoccoides] | 0 |
| P40781 | Protein CYPRO4 OS=Cynara cardunculus OX=4265 GN=CYPRO4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6PJN8 | VID27 domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG026750.