Basic Information
Locus ID:
gene:TRIDC6BG026740
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 203640467 | 203641427 | + | gene:TRIDC6BG026740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.09 | 19,755.99 Da | 84.88 | 87.20 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 143 | 185 | 8.1E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 142 | 191 | 9.32E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 130 | 190 | 1.1E-16 | IPR013083 |
| SMART | SM00184 | ring_2 | 143 | 184 | 4.8E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 143 | 185 | 12.017182 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 39 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G35480.1 | RING-H2 finger A3B. Encodes a putative RING-H2 finger protein RHA3b. | 0 |
| RefSeq | XP_037453725.1 | RING-H2 finger protein ATL56-like [Triticum dicoccoides] | 0 |
| Q9ZT49 | Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=ATL45 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PL83 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG026740.