Basic Information
Locus ID:
gene:TRIDC6BG025930
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
BRCA1-associated protein 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 192580977 | 192585523 | + | gene:TRIDC6BG025930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.44 | 53,647.79 Da | 47.90 | 74.62 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16457 | RING-H2_BRAP2 | 168 | 211 | 1.54382E-26 | - |
| CDD | cd12437 | RRM_BRAP2_like | 68 | 148 | 1.29442E-31 | - |
| Pfam | PF02148 | Zn-finger in ubiquitin-hydrolases and other protein | 221 | 280 | 1.1E-20 | IPR001607 |
| Pfam | PF13639 | Ring finger domain | 169 | 210 | 1.3E-8 | IPR001841 |
| Pfam | PF07576 | BRCA1-associated protein 2 | 61 | 157 | 3.6E-34 | IPR011422 |
| SUPERFAMILY | SSF57850 | RING/U-box | 186 | 285 | 2.12E-27 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 161 | 210 | 3.77E-5 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 148 | 212 | 1.6E-10 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 213 | 291 | 2.5E-15 | IPR013083 |
| SMART | SM00184 | ring_2 | 170 | 209 | 1.2E-6 | IPR001841 |
| SMART | SM00290 | Zf_UBP_1 | 220 | 269 | 2.7E-25 | IPR001607 |
| ProSiteProfiles | PS50271 | Zinc finger UBP-type profile. | 219 | 280 | 20.638266 | IPR001607 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 170 | 210 | 13.079398 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 485 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 476 | - | - |
| Coils | Coil | Coil | 338 | 358 | - | - |
| Coils | Coil | Coil | 373 | 393 | - | - |
| Coils | Coil | Coil | 412 | 446 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26000.2 | zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_037452735.1 | BRAP2 RING ZnF UBP domain-containing protein 2-like [Triticum dicoccoides] | 0 |
| O80996 | BRAP2 RING ZnF UBP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BRIZ2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PKY8 | BRCA1-associated protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG025930.