Basic Information
Locus ID:
gene:TRIDC6BG024550
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Domain of unknown function (DUF4704)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 177429954 | 177458595 | - | gene:TRIDC6BG024550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.47 | 137,241.77 Da | 44.73 | 84.14 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01201 | PH_BEACH | 386 | 532 | 7.89411E-22 | IPR023362 |
| CDD | cd06071 | Beach | 568 | 843 | 2.5356E-152 | IPR000409 |
| Pfam | PF02138 | Beige/BEACH domain | 567 | 843 | 3.8E-120 | IPR000409 |
| Pfam | PF14844 | PH domain associated with Beige/BEACH | 392 | 526 | 2.8E-15 | IPR023362 |
| Pfam | PF00400 | WD domain, G-beta repeat | 1043 | 1076 | 0.0025 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 978 | 1014 | 1.7E-6 | IPR001680 |
| SUPERFAMILY | SSF81837 | BEACH domain | 550 | 843 | 1.44E-123 | IPR036372 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 950 | 1210 | 2.5E-39 | IPR036322 |
| SUPERFAMILY | SSF50729 | PH domain-like | 385 | 531 | 2.77E-19 | - |
| Gene3D | G3DSA:1.10.1540.10 | BEACH domain | 556 | 843 | 1.4E-135 | IPR036372 |
| Gene3D | G3DSA:2.130.10.10 | - | 1126 | 1223 | 2.0E-6 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 869 | 1125 | 6.3E-27 | IPR015943 |
| Gene3D | G3DSA:2.30.29.30 | - | 384 | 526 | 1.4E-20 | IPR011993 |
| SMART | SM00320 | WD40_4 | 976 | 1015 | 1.3E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1166 | 1204 | 0.43 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1041 | 1080 | 0.037 | IPR001680 |
| SMART | SM01026 | Beach_2 | 565 | 843 | 2.7E-196 | IPR000409 |
| SMART | SM00320 | WD40_4 | 1125 | 1163 | 60.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1083 | 1123 | 110.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 983 | 1014 | 13.248743 | IPR001680 |
| ProSiteProfiles | PS51783 | BEACH-type PH domain profile. | 381 | 529 | 27.456352 | IPR023362 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 983 | 1014 | 10.996502 | - |
| ProSiteProfiles | PS50197 | BEACH domain profile. | 553 | 843 | 119.803009 | IPR000409 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 328 | 382 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 382 | - | - |
| Coils | Coil | Coil | 162 | 196 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G58230.1 | binding. | 0 |
| RefSeq | XP_037453280.1 | BEACH domain-containing protein B-like isoform X1 [Triticum dicoccoides] | 0 |
| F4I9T0 | BEACH domain-containing protein B OS=Arabidopsis thaliana OX=3702 GN=BCHB PE=4 SV=1 | 0 | |
| TrEMBL | A0A3B6PIZ2 | DUF4704 domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG024550.