Basic Information
Locus ID:
gene:TRIDC6BG023580
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 169160601 | 169162656 | + | gene:TRIDC6BG023580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 74,323.95 Da | 35.10 | 94.93 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 366 | 635 | 8.56422E-91 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 34 | 277 | 4.5124E-97 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 34 | 288 | 2.2E-70 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 360 | 631 | 4.4E-49 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 34 | 295 | 1.54E-71 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 335 | 633 | 2.46E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 437 | 650 | 4.0E-58 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 30 | 277 | 2.6E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 345 | 436 | 4.5E-32 | - |
| SMART | SM00220 | serkin_6 | 360 | 633 | 7.3E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 360 | 637 | 37.445927 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 366 | 390 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 484 | 496 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37710.1 | receptor lectin kinase. Induced in response to Salicylic acid. | 0 |
| RefSeq | XP_037453189.1 | L-type lectin-domain containing receptor kinase SIT2-like [Triticum dicoccoides] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6PHE6 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG023580.