Basic Information
Locus ID:
gene:TRIDC6BG023570
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 169151372 | 169153414 | + | gene:TRIDC6BG023570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 74,675.38 Da | 30.90 | 96.48 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 358 | 631 | 1.04931E-86 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 34 | 270 | 4.79075E-101 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 33 | 281 | 2.9E-73 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 353 | 627 | 2.3E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 327 | 629 | 1.48E-77 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 33 | 289 | 1.26E-73 | IPR013320 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 429 | 635 | 4.7E-55 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 29 | 269 | 1.1E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 337 | 428 | 9.8E-32 | - |
| SMART | SM00220 | serkin_6 | 352 | 629 | 9.7E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 352 | 645 | 36.753361 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 358 | 381 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 480 | 492 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37710.1 | receptor lectin kinase. Induced in response to Salicylic acid. | 0 |
| RefSeq | XP_037453190.1 | L-type lectin-domain containing receptor kinase SIT2-like [Triticum dicoccoides] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6PIT4 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG023570.