Basic Information
Locus ID:
gene:TRIDC6BG022340
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 160620604 | 160624524 | - | gene:TRIDC6BG022340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 117,263.78 Da | 35.15 | 97.87 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 778 | 1042 | 6.98491E-90 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 604 | 626 | 0.11 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 773 | 1040 | 2.0E-39 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 253 | 312 | 1.5E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 326 | 386 | 2.8E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 451 | 510 | 1.5E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 76 | 1.4E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 268 | 3.57E-40 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 760 | 1042 | 7.28E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 558 | 665 | 4.76E-22 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 206 | 525 | 3.92E-58 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 848 | 1051 | 2.6E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 177 | 269 | 1.0E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 270 | 344 | 1.7E-19 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 733 | 847 | 3.5E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 345 | 677 | 7.2E-90 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 176 | 4.8E-31 | IPR032675 |
| SMART | SM00220 | serkin_6 | 772 | 1043 | 2.4E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 602 | 626 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 276 | 299 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 103 | 127 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 473 | 497 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 300 | 324 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 349 | 373 | 41.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 772 | 1052 | 36.979504 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 895 | 907 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 778 | 801 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G72300.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of PSY1. PSY1 is an 18-aa tyrosine-sulfated glycopeptide encoded by AT5G58650 that promotes cellular proliferation and expansion. | 0 |
| RefSeq | XP_037451258.1 | tyrosine-sulfated glycopeptide receptor 1-like [Triticum dicoccoides] | 0 |
| Q9C7S5 | Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana OX=3702 GN=PSY1R PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PKE6 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG022340.