Basic Information
Locus ID:
gene:TRIDC6BG022320
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 160228637 | 160232871 | - | gene:TRIDC6BG022320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.11 | 112,761.08 Da | 38.16 | 97.29 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 758 | 1025 | 1.48784E-89 | - |
| Pfam | PF13855 | Leucine rich repeat | 427 | 486 | 5.9E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 753 | 970 | 3.9E-38 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 535 | 591 | 9.9E-9 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 106 | 123 | 0.73 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 76 | 4.7E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 243 | 2.49E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 739 | 1022 | 5.13E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 204 | 637 | 5.44E-67 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 151 | 246 | 5.5E-23 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 828 | 1028 | 1.2E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 321 | 653 | 4.8E-88 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 713 | 827 | 3.2E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 247 | 320 | 9.2E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 40 | 150 | 2.2E-27 | IPR032675 |
| SMART | SM00220 | serkin_6 | 752 | 1025 | 1.1E-27 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 276 | 300 | 29.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 578 | 602 | 10.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 103 | 127 | 23.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 252 | 275 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 325 | 349 | 31.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 752 | 1029 | 36.018391 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 875 | 887 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 758 | 781 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 578 | 591 | 3.0E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 106 | 119 | 3.0E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G72300.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of PSY1. PSY1 is an 18-aa tyrosine-sulfated glycopeptide encoded by AT5G58650 that promotes cellular proliferation and expansion. | 0 |
| RefSeq | XP_037453519.1 | tyrosine-sulfated glycopeptide receptor 1-like [Triticum dicoccoides] | 0 |
| Q9C7S5 | Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana OX=3702 GN=PSY1R PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PIL4 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG022320.