Basic Information
Locus ID:
gene:TRIDC6BG022280
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 159724959 | 159728581 | - | gene:TRIDC6BG022280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.15 | 115,827.25 Da | 35.87 | 98.15 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 778 | 1045 | 1.62222E-90 | - |
| Pfam | PF13855 | Leucine rich repeat | 559 | 615 | 2.2E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 341 | 386 | 2.1E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 76 | 5.4E-10 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 106 | 121 | 1.1 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 773 | 1039 | 2.6E-37 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 238 | 661 | 6.46E-67 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 339 | 1.02E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 760 | 1043 | 1.09E-74 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 848 | 1056 | 8.2E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 736 | 847 | 6.0E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 174 | 4.2E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 175 | 271 | 1.5E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 343 | 676 | 2.6E-88 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 272 | 342 | 6.8E-19 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 349 | 373 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 397 | 419 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 203 | 227 | 6.6 | IPR003591 |
| SMART | SM00220 | serkin_6 | 772 | 1045 | 3.0E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 602 | 626 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 103 | 127 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 276 | 300 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 473 | 497 | 320.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 772 | 1051 | 35.862919 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 895 | 907 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 778 | 801 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 106 | 119 | 2.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 602 | 615 | 2.7E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G72300.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of PSY1. PSY1 is an 18-aa tyrosine-sulfated glycopeptide encoded by AT5G58650 that promotes cellular proliferation and expansion. | 0 |
| RefSeq | XP_037455108.1 | tyrosine-sulfated glycopeptide receptor 1-like isoform X1 [Triticum dicoccoides] | 0 |
| Q9C7S5 | Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana OX=3702 GN=PSY1R PE=1 SV=1 | 0 | |
| TrEMBL | R7W0Q3 | Tyrosine-sulfated glycopeptide receptor 1 OS=Aegilops tauschii OX=37682 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG022280.