Basic Information
Locus ID:
gene:TRIDC6BG022260
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 159697387 | 159700641 | - | gene:TRIDC6BG022260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 115,951.70 Da | 33.73 | 100.94 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 764 | 1028 | 5.76029E-90 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 264 | 285 | 0.63 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 590 | 609 | 0.28 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 92 | 108 | 1.0 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 758 | 1024 | 1.7E-39 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 312 | 372 | 4.8E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 62 | 3.3E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 437 | 496 | 4.3E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 276 | 2.89E-39 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 744 | 1028 | 2.97E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 195 | 646 | 2.55E-71 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 258 | 329 | 3.4E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 330 | 663 | 3.2E-92 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 834 | 1048 | 5.2E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 139 | 5.5E-27 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 720 | 833 | 9.2E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 140 | 257 | 1.0E-26 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 335 | 359 | 400.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 588 | 611 | 0.093 | IPR003591 |
| SMART | SM00220 | serkin_6 | 758 | 1031 | 1.7E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 459 | 483 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 262 | 285 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 89 | 113 | 49.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 286 | 310 | 13.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 758 | 1031 | 36.131462 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 590 | 613 | 7.034293 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 91 | 112 | 7.257614 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 881 | 893 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 764 | 787 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 92 | 105 | 2.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 588 | 601 | 2.5E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G72300.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of PSY1. PSY1 is an 18-aa tyrosine-sulfated glycopeptide encoded by AT5G58650 that promotes cellular proliferation and expansion. | 0 |
| RefSeq | XP_037455107.1 | tyrosine-sulfated glycopeptide receptor 1-like [Triticum dicoccoides] | 0 |
| Q9C7S5 | Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana OX=3702 GN=PSY1R PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6QDT4 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG022260.