Basic Information
Locus ID:
gene:TRIDC6BG022230
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine Rich Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 159569477 | 159571710 | - | gene:TRIDC6BG022230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 77,649.48 Da | 33.32 | 100.97 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 424 | 688 | 2.595E-92 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 250 | 272 | 0.083 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 98 | 157 | 5.5E-10 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 419 | 685 | 4.6E-39 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 405 | 688 | 1.23E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 2 | 311 | 7.99E-56 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 494 | 696 | 4.7E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 323 | 1.7E-88 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 378 | 493 | 2.1E-32 | - |
| SMART | SM00220 | serkin_6 | 418 | 691 | 3.3E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 418 | 691 | 36.2304 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 541 | 553 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 424 | 447 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 248 | 261 | 5.2E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 147 | 160 | 5.2E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G72300.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of PSY1. PSY1 is an 18-aa tyrosine-sulfated glycopeptide encoded by AT5G58650 that promotes cellular proliferation and expansion. | 0 |
| RefSeq | XP_037451636.1 | tyrosine-sulfated glycopeptide receptor 1-like [Triticum dicoccoides] | 0 |
| Q9C7S5 | Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana OX=3702 GN=PSY1R PE=1 SV=1 | 0 | |
| TrEMBL | M8B4K0 | Tyrosine-sulfated glycopeptide receptor 1 OS=Aegilops tauschii OX=37682 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG022230.