Basic Information
Locus ID:
gene:TRIDC6BG022220
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 159554002 | 159559109 | - | gene:TRIDC6BG022220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 116,712.27 Da | 36.11 | 98.05 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 811 | 1069 | 8.68699E-88 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 639 | 661 | 0.0042 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 805 | 1069 | 3.5E-38 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 75 | 111 | 8.9E-9 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 307 | 686 | 1.1E-58 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 791 | 1069 | 3.64E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 94 | 373 | 7.65E-43 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 881 | 1069 | 9.6E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 71 | 213 | 3.9E-30 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 769 | 880 | 1.9E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 378 | 710 | 5.1E-87 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 306 | 377 | 8.3E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 214 | 305 | 2.0E-20 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 637 | 660 | 0.083 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 431 | 453 | 55.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 334 | 358 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 508 | 531 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 383 | 407 | 180.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 805 | 1050 | 6.0E-27 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 639 | 660 | 7.634948 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 805 | 1069 | 35.650906 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 928 | 940 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 811 | 834 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 535 | 548 | 5.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 637 | 650 | 5.8E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G72300.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of PSY1. PSY1 is an 18-aa tyrosine-sulfated glycopeptide encoded by AT5G58650 that promotes cellular proliferation and expansion. | 0 |
| RefSeq | XP_037451635.1 | tyrosine-sulfated glycopeptide receptor 1-like [Triticum dicoccoides] | 0 |
| Q9C7S5 | Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana OX=3702 GN=PSY1R PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PH59 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG022220.