Basic Information
Locus ID:
gene:TRIDC6BG022200
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 159463759 | 159468826 | - | gene:TRIDC6BG022200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 113,717.21 Da | 36.52 | 101.69 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 769 | 1036 | 4.2445E-98 | - |
| Pfam | PF13855 | Leucine rich repeat | 322 | 382 | 1.2E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 551 | 608 | 1.1E-10 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 764 | 1030 | 2.9E-41 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 73 | 5.1E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 447 | 506 | 5.7E-8 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 84 | 359 | 8.63E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 744 | 1033 | 4.59E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 269 | 650 | 4.76E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 151 | 237 | 8.3E-12 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 724 | 838 | 1.4E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 150 | 4.3E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 238 | 339 | 5.8E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 340 | 671 | 4.7E-90 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 839 | 1042 | 5.9E-62 | - |
| SMART | SM00369 | LRR_typ_2 | 469 | 493 | 6.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 296 | 320 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 571 | 594 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 101 | 125 | 78.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 393 | 418 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 272 | 295 | 92.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 595 | 619 | 13.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 763 | 1033 | 1.6E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 345 | 369 | 48.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 763 | 1033 | 37.17738 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 886 | 898 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 769 | 792 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 595 | 608 | 4.4E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 574 | 587 | 4.4E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G72300.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of PSY1. PSY1 is an 18-aa tyrosine-sulfated glycopeptide encoded by AT5G58650 that promotes cellular proliferation and expansion. | 0 |
| RefSeq | XP_037455720.1 | tyrosine-sulfated glycopeptide receptor 1-like [Triticum dicoccoides] | 0 |
| Q9C7S5 | Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana OX=3702 GN=PSY1R PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PKA3 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG022200.