Basic Information
Locus ID:
gene:TRIDC6BG021790
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 155432163 | 155436491 | + | gene:TRIDC6BG021790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.46 | 68,497.52 Da | 70.96 | 63.10 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 562 | 604 | 8.6E-10 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 555 | 609 | 1.54E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 544 | 608 | 4.8E-16 | IPR013083 |
| SMART | SM00184 | ring_2 | 563 | 603 | 7.7E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 563 | 604 | 11.648357 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 94 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 198 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 341 | 356 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 68 | 94 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 413 | 446 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 168 | 208 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 370 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 334 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 416 | 446 | - | - |
| Coils | Coil | Coil | 471 | 491 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24870.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037452658.1 | E3 ubiquitin-protein ligase RLIM-like [Triticum dicoccoides] | 0 |
| O49500 | E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PKA6 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG021790.