Basic Information
Locus ID:
gene:TRIDC6BG020280
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
FBD
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 142574072 | 142581625 | - | gene:TRIDC6BG020280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.77 | 63,770.75 Da | 50.37 | 95.21 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08387 | FBD | 431 | 471 | 6.4E-12 | IPR006566 |
| Pfam | PF00646 | F-box domain | 96 | 130 | 8.1E-7 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 197 | 415 | 2.28E-9 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 96 | 141 | 1.96E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 91 | 140 | 1.4E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 171 | 485 | 2.0E-11 | IPR032675 |
| SMART | SM00579 | 9598neu4hmm | 433 | 510 | 2.3E-4 | IPR006566 |
| SMART | SM00256 | fbox_2 | 100 | 140 | 0.0012 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 94 | 130 | 8.517177 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 490 | 504 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 484 | 507 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 65 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 95 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22660.1 | FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein. | 0 |
| RefSeq | XP_037450735.1 | putative FBD-associated F-box protein At5g56440 [Triticum dicoccoides] | 0 |
| Q9LJF9 | F-box/FBD/LRR-repeat protein At3g26920 OS=Arabidopsis thaliana OX=3702 GN=At3g26920 PE=2 SV=3 | 0 | |
| TrEMBL | A0A3B6QDE0 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG020280.