Basic Information
Locus ID:
gene:TRIDC6BG013160
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 72426227 | 72430478 | - | gene:TRIDC6BG013160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 83,125.48 Da | 43.16 | 84.32 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 350 | 393 | 5.39895E-4 | - |
| Pfam | PF00069 | Protein kinase domain | 461 | 719 | 2.5E-40 | IPR000719 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 49 | 89 | 4.4E-9 | IPR025287 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 436 | 723 | 2.32E-64 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 432 | 531 | 1.8E-24 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 306 | 393 | 6.1E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 532 | 739 | 1.1E-43 | - |
| SMART | SM00179 | egfca_6 | 350 | 393 | 1.2E-4 | IPR001881 |
| SMART | SM00220 | serkin_6 | 456 | 723 | 4.8E-17 | IPR000719 |
| SMART | SM00181 | egf_5 | 300 | 349 | 54.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 353 | 393 | 0.026 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 456 | 723 | 32.654499 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 350 | 393 | 9.272118 | IPR000742 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 350 | 377 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 462 | 484 | - | IPR017441 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 368 | 379 | - | IPR000152 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 577 | 589 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 0 |
| RefSeq | XP_037455204.1 | wall-associated receptor kinase 1-like [Triticum dicoccoides] | 0 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6PIJ8 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG013160.