HalophFGD

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Basic Information
Locus ID: gene:TRIDC6BG008100
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Short Name: 5
Description: BTB/POZ domain
Maps and Mapping Data
Chromosome Start End Strand ID
6B 40715964 40720000 - gene:TRIDC6BG008100
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.01 37,577.52 Da 82.86 69.65 -0.54
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd18186 BTB_POZ_ZBTB_KLHL-like 177 246 3.69489E-27 -
CDD cd14733 BACK 264 318 7.43926E-4 -
Pfam PF00651 BTB/POZ domain 176 261 6.9E-22 IPR000210
SUPERFAMILY SSF54695 POZ domain 177 261 2.09E-25 IPR011333
Gene3D G3DSA:1.25.40.420 - 265 336 1.1E-7 -
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 165 264 5.0E-30 IPR011333
SMART SM00225 BTB_4 144 263 4.7E-19 IPR000210
ProSiteProfiles PS50097 BTB domain profile. 177 233 16.424553 IPR000210
MobiDBLite mobidb-lite consensus disorder prediction 1 83 - -
Coils Coil Coil 101 125 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G08455.1 BTB/POZ domain-containing protein. 0
RefSeq XP_037454264.1 BTB/POZ domain-containing protein At4g08455-like [Triticum dicoccoides] 0
Swiss-Prot Q6DBN1 BTB/POZ domain-containing protein At4g08455 OS=Arabidopsis thaliana OX=3702 GN=At4g08455 PE=1 SV=1 0
TrEMBL A0A453MW75 BTB domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 0
Expression
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BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC6BG008100.

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