Basic Information
Locus ID:
gene:TRIDC6BG007560
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 38302330 | 38323127 | + | gene:TRIDC6BG007560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.45 | 85,131.39 Da | 36.93 | 86.32 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 338 | 367 | 8.85366E-8 | - |
| CDD | cd14066 | STKc_IRAK | 466 | 730 | 1.63595E-84 | - |
| Pfam | PF00069 | Protein kinase domain | 461 | 724 | 1.0E-41 | IPR000719 |
| Pfam | PF07645 | Calcium-binding EGF domain | 338 | 371 | 2.3E-5 | IPR001881 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 52 | 114 | 5.0E-14 | IPR025287 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 444 | 726 | 2.56E-72 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 335 | 369 | 4.78E-7 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 290 | 341 | 1.8E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 421 | 535 | 3.3E-28 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 342 | 381 | 3.4E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 536 | 752 | 8.9E-53 | - |
| SMART | SM00220 | serkin_6 | 460 | 734 | 8.0E-32 | IPR000719 |
| SMART | SM00181 | egf_5 | 299 | 337 | 14.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 341 | 379 | 0.081 | IPR000742 |
| SMART | SM00179 | egfca_6 | 338 | 379 | 3.9E-5 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 460 | 734 | 35.45303 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 338 | 373 | 9.575698 | IPR000742 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 466 | 489 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 581 | 593 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 338 | 362 | - | IPR018097 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 353 | 364 | - | IPR000152 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21240.1 | wall associated kinase 3. encodes a wall-associated kinase | 0 |
| RefSeq | XP_037456149.1 | wall-associated receptor kinase 2-like [Triticum dicoccoides] | 0 |
| Q9LMN8 | Wall-associated receptor kinase 3 OS=Arabidopsis thaliana OX=3702 GN=WAK3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6QCE3 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG007560.