Basic Information
Locus ID:
gene:TRIDC6BG007330
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 37137584 | 37161899 | - | gene:TRIDC6BG007330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 138,343.20 Da | 38.34 | 89.95 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 470 | 711 | 1.27685E-39 | - |
| Pfam | PF00069 | Protein kinase domain | 40 | 303 | 2.6E-48 | IPR000719 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 320 | 391 | 9.9E-8 | IPR000535 |
| Pfam | PF00400 | WD domain, G-beta repeat | 633 | 669 | 3.7E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 1144 | 1180 | 0.04 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 1103 | 1139 | 3.9E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 676 | 711 | 0.05 | IPR001680 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 25 | 299 | 4.86E-68 | IPR011009 |
| SUPERFAMILY | SSF49354 | PapD-like | 796 | 927 | 8.63E-9 | IPR008962 |
| SUPERFAMILY | SSF49354 | PapD-like | 306 | 428 | 6.8E-13 | IPR008962 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 934 | 1213 | 3.66E-37 | IPR036322 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 468 | 731 | 2.85E-46 | IPR036322 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 128 | 310 | 2.8E-45 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 465 | 754 | 4.5E-66 | IPR015943 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 792 | 927 | 3.8E-16 | IPR013783 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 17 | 109 | 1.4E-21 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 313 | 444 | 3.4E-14 | IPR013783 |
| Gene3D | G3DSA:2.130.10.10 | - | 937 | 1217 | 1.1E-54 | IPR015943 |
| SMART | SM00320 | WD40_4 | 1142 | 1180 | 1.7E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 931 | 969 | 1.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 497 | 536 | 0.46 | IPR001680 |
| SMART | SM00320 | WD40_4 | 457 | 494 | 9.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 539 | 579 | 1.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 972 | 1011 | 48.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1057 | 1095 | 2.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1098 | 1139 | 2.4E-6 | IPR001680 |
| SMART | SM00220 | serkin_6 | 38 | 300 | 5.5E-37 | IPR000719 |
| SMART | SM00320 | WD40_4 | 629 | 670 | 4.4E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 583 | 626 | 7.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 673 | 712 | 2.0E-4 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 680 | 711 | 9.54651 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1105 | 1148 | 10.241105 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 1105 | 1141 | 8.597424 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 636 | 669 | 9.203785 | - |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 318 | 441 | 14.100369 | IPR000535 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 636 | 669 | 10.976305 | IPR001680 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 798 | 925 | 9.051495 | IPR000535 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 680 | 711 | 11.410742 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 38 | 300 | 36.541351 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 44 | 65 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 168 | 180 | - | IPR008271 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 1126 | 1140 | - | IPR019775 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21410.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 29. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_037454909.1 | uncharacterized protein LOC119325270 isoform X2 [Triticum dicoccoides] | 0 |
| Q8S9L6 | Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana OX=3702 GN=CRK29 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7VCS2 | Coatomer subunit beta'-2 OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG007330.