Basic Information
Locus ID:
gene:TRIDC6BG006310
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 31233647 | 31240417 | - | gene:TRIDC6BG006310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.49 | 110,897.17 Da | 35.36 | 99.07 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 7 | 44 | 7.1E-13 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 98 | 120 | 0.68 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 122 | 181 | 2.8E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 709 | 936 | 2.9E-38 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 514 | 573 | 5.4E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 320 | 380 | 2.1E-7 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 258 | 604 | 4.87E-59 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 686 | 1006 | 1.91E-65 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 5 | 305 | 9.18E-65 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 687 | 790 | 1.4E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 291 | 641 | 1.2E-95 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 791 | 1022 | 2.4E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 5 | 290 | 2.3E-82 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 391 | 414 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 241 | 264 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 192 | 216 | 48.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 439 | 463 | 350.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 488 | 512 | 38.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 367 | 390 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 168 | 191 | 200.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 707 | 1013 | 1.6E-24 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 318 | 342 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 584 | 609 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 72 | 96 | 30.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 707 | 1017 | 34.195107 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 840 | 852 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 713 | 738 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47110.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037455792.1 | putative receptor-like protein kinase At3g47110 [Triticum dicoccoides] | 0 |
| Q9SD62 | Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana OX=3702 GN=At3g47110 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6PH95 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG006310.