Basic Information
Locus ID:
gene:TRIDC6BG004080
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 20217119 | 20222123 | - | gene:TRIDC6BG004080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.91 | 105,722.84 Da | 42.55 | 82.28 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 484 | 511 | 4.7983E-5 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 330 | 389 | 2.4E-9 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 612 | 876 | 8.2E-46 | IPR000719 |
| SUPERFAMILY | SSF57184 | Growth factor receptor domain | 441 | 525 | 3.69E-5 | IPR009030 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 592 | 880 | 3.91E-75 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 443 | 521 | 1.2E-8 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 685 | 895 | 1.2E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 572 | 684 | 4.9E-30 | - |
| SMART | SM00179 | egfca_6 | 484 | 524 | 6.0E-4 | IPR001881 |
| SMART | SM00220 | serkin_6 | 609 | 883 | 1.5E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 609 | 883 | 37.403522 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 615 | 638 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 731 | 743 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21230.1 | wall associated kinase 5. encodes a wall-associated kinase | 0 |
| RefSeq | XP_037456213.1 | wall-associated receptor kinase-like 6 isoform X1 [Triticum dicoccoides] | 0 |
| Q9LMN7 | Wall-associated receptor kinase 5 OS=Arabidopsis thaliana OX=3702 GN=WAK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I6Y964 | Protein kinase domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG004080.