Basic Information
Locus ID:
gene:TRIDC6BG003740
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 18574087 | 18575255 | - | gene:TRIDC6BG003740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.39 | 20,045.66 Da | 65.50 | 73.44 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 133 | 184 | 6.12275E-16 | - |
| Pfam | PF17123 | RING-like zinc finger | 133 | 162 | 5.1E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 133 | 188 | 1.84E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 129 | 187 | 1.4E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 134 | 183 | 2.2E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 134 | 184 | 12.636808 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47610.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037451223.1 | RING-H2 finger protein ATL79-like [Triticum dicoccoides] | 0 |
| Q9FGJ6 | RING-H2 finger protein ATL79 OS=Arabidopsis thaliana OX=3702 GN=ATL79 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6PGC1 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG003740.