Basic Information
Locus ID:
gene:TRIDC6BG003080
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
ubiquitin-protein transferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 15462227 | 15462955 | + | gene:TRIDC6BG003080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 7,180.23 Da | 54.48 | 74.29 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04564 | U-box domain | 1 | 56 | 1.4E-13 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 1 | 59 | 3.11E-16 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 62 | 2.6E-16 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 1 | 53 | 1.9E-8 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 1 | 60 | 19.037712 | IPR003613 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G25160.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_037456172.1 | putative U-box domain-containing protein 53 [Triticum dicoccoides] | 0 |
| Q9SW11 | U-box domain-containing protein 35 OS=Arabidopsis thaliana OX=3702 GN=PUB35 PE=2 SV=2 | 0 | |
| TrEMBL | A0A452XF83 | E3 ubiquitin ligase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG003080.