Basic Information
Locus ID:
gene:TRIDC6BG002160
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Large proline-rich protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 12464876 | 12472778 | + | gene:TRIDC6BG002160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.86 | 100,084.64 Da | 50.40 | 72.96 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 28 | 95 | 2.38267E-24 | - |
| Pfam | PF00240 | Ubiquitin family | 28 | 98 | 6.0E-23 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 22 | 97 | 1.08E-24 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 22 | 119 | 3.0E-26 | - |
| SMART | SM00213 | ubq_7 | 26 | 97 | 2.0E-24 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 26 | 101 | 24.333218 | IPR000626 |
| ProSitePatterns | PS00299 | Ubiquitin domain signature. | 52 | 77 | - | IPR019954 |
| PRINTS | PR00348 | Ubiquitin signature | 78 | 99 | 3.7E-10 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 36 | 56 | 3.7E-10 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 57 | 77 | 3.7E-10 | IPR019956 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 413 | 453 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 571 | 650 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 101 | 115 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 507 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 869 | 902 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 751 | 772 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 666 | 733 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 705 | 733 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 751 | 765 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 119 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 413 | 445 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42220.1 | Ubiquitin-like superfamily protein. | 0 |
| RefSeq | XP_037455083.1 | ubiquitin-like domain-containing protein CIP73 isoform X1 [Triticum dicoccoides] | 0 |
| D5LXJ0 | Ubiquitin-like domain-containing protein CIP73 OS=Lotus japonicus OX=34305 GN=CIP73 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PEQ0 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG002160.