Basic Information
Locus ID:
gene:TRIDC6BG000490
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 4893039 | 4896250 | - | gene:TRIDC6BG000490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 97,172.90 Da | 40.40 | 105.46 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 710 | 868 | 1.4E-28 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 395 | 455 | 2.2E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 70 | 1.2E-11 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 258 | 388 | 1.33E-19 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 279 | 1.25E-47 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 372 | 625 | 1.09E-57 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 680 | 873 | 6.34E-46 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 337 | 634 | 2.7E-84 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 265 | 336 | 7.1E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 171 | 264 | 5.7E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 170 | 7.6E-36 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 695 | 890 | 1.6E-46 | - |
| SMART | SM00369 | LRR_typ_2 | 124 | 148 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 586 | 611 | 23.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 217 | 241 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 266 | 291 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 442 | 465 | 50.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 706 | 890 | 1.4E-7 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 394 | 417 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 315 | 338 | 68.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 706 | 890 | 26.986765 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 712 | 735 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 839 | 851 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G39390.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037451496.1 | probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Triticum dicoccoides] | 0 |
| C0LGP4 | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7QIW5 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG000490.