Basic Information
Locus ID:
gene:TRIDC6BG000280
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 3192842 | 3199736 | - | gene:TRIDC6BG000280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.88 | 81,042.32 Da | 39.38 | 87.31 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 353 | 382 | 1.26681E-6 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 36 | 68 | 6.0E-7 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 465 | 725 | 3.8E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 462 | 728 | 6.83E-68 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 349 | 397 | 9.21E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 537 | 734 | 1.1E-51 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 312 | 396 | 1.6E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 443 | 536 | 4.2E-21 | - |
| SMART | SM00181 | egf_5 | 316 | 352 | 1.1 | IPR000742 |
| SMART | SM00181 | egf_5 | 356 | 396 | 0.066 | IPR000742 |
| SMART | SM00179 | egfca_6 | 353 | 396 | 1.1E-7 | IPR001881 |
| SMART | SM00220 | serkin_6 | 462 | 728 | 1.2E-31 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 353 | 396 | 11.07926 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 462 | 728 | 35.763981 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 468 | 490 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 581 | 593 | - | IPR008271 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 371 | 382 | - | IPR000152 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 353 | 380 | - | IPR018097 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 0 |
| RefSeq | XP_037450641.1 | wall-associated receptor kinase 1-like [Triticum dicoccoides] | 0 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7S9C0X0 | SnTox1 sensitivity protein OS=Triticum turgidum subsp. durum OX=4567 GN=Snn1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG000280.