Basic Information
Locus ID:
gene:TRIDC6AG061550
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 619884723 | 619886647 | - | gene:TRIDC6AG061550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.23 | 61,395.49 Da | 38.44 | 81.20 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 76 | 351 | 6.84447E-130 | - |
| Pfam | PF00069 | Protein kinase domain | 76 | 352 | 6.4E-69 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 470 | 532 | 8.3E-13 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 400 | 461 | 4.4E-13 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 376 | 535 | 1.84E-44 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 59 | 377 | 1.48E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 162 | 359 | 1.3E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 78 | 161 | 7.4E-26 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 360 | 534 | 4.0E-59 | - |
| SMART | SM00220 | serkin_6 | 76 | 352 | 5.2E-93 | IPR000719 |
| SMART | SM00054 | efh_1 | 506 | 534 | 6.0E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 472 | 500 | 0.0015 | IPR002048 |
| SMART | SM00054 | efh_1 | 399 | 427 | 3.2E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 436 | 464 | 2.4E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 507 | 537 | 11.695971 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 432 | 467 | 11.863342 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 468 | 503 | 14.094975 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 76 | 352 | 45.262028 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 395 | 430 | 15.88028 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 196 | 208 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 445 | 457 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 82 | 109 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 515 | 527 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 481 | 493 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 408 | 420 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38230.2 | calcium-dependent protein kinase 26. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_037449217.1 | calcium-dependent protein kinase 26-like [Triticum dicoccoides] | 0 |
| Q9FXQ3 | Calcium-dependent protein kinase 13 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK13 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6NW25 | Calcium-dependent protein kinase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG061550.